evidence_cancer_gene_census
Identifier
Section titled “Identifier”Description
Section titled “Description”Disease-target evidence based on Cancer Gene Census provided by COSMIC [Target-Disease]
Partitions
Section titled “Partitions”release'26.06'
Schema
Section titled “Schema”| Column | Type | Description |
|---|---|---|
targetId |
TEXT |
Open Targets target identifier |
id |
TEXT |
Identifer of the disease/target evidence |
targetFromSourceId |
TEXT |
Target ID in resource of origin (accepted sources include Ensembl gene ID, Uniprot ID, gene symbol), only capital letters are accepted |
diseaseFromSourceMappedId |
TEXT |
Mapped Open Targets disease identifier |
datasourceId |
TEXT |
Identifer of the evidence source |
datatypeId |
TEXT |
Type of the evidence |
diseaseFromSourceId |
TEXT |
Disease identifier from the original source |
literature |
TEXT[] |
List of PubMed or preprint reference identifiers |
mutatedSamples |
STRUCT(functionalConsequenceId TEXT, numberMutatedSamples BIGINT, numberSamplesTested BIGINT, numberSamplesWithMutationType BIGINT)[] |
Samples with a given mutation tested |
resourceScore |
DOUBLE |
Score provided by datasource indicating strength of target-disease association |
studyId |
TEXT |
Identifier of the study generating the data |
qualityControls |
TEXT[] |
Evidence quality flags |
diseaseId |
TEXT |
Open Targets disease identifier |
publicationDate |
TEXT |
Date of the earliest publication supporting the evidence |
evidenceDate |
TEXT |
Earliest data for the evidence |
score |
DOUBLE |
Score of the evidence reflecting the strength of the disease/target relationship |
directionOnTrait |
TEXT |
Predicted direction of effect on the trait |
directionOnTarget |
TEXT |
Gain or loss of function effect of the evidence on the target resulting from genetic variants, pharmacological modulation, or other perturbations |
release |
TEXT |
Partition column. Open Targets Platform release version (major.minor), e.g. 26.06. [Added during ingest.] |