refseq_uniprot_mapping
Identifier
Section titled “Identifier”Description
Section titled “Description”NCBI RefSeq protein to UniProtKB protein mappings, one row per reported accession pair.
Partitions
Section titled “Partitions”Not partitioned.
Schema
Section titled “Schema”| Column | Type | Description |
|---|---|---|
sources |
STRUCT(url TEXT, filename TEXT, last_modified_at TIMESTAMPTZ, sha256 TEXT)[] |
Provenance for the NCBI RefSeq–UniProtKB collaboration file. |
refseq_accession |
TEXT |
RefSeq protein accession. |
uniprot_accession |
TEXT |
Corresponding UniProt protein accession. |
refseq_taxon_id |
TEXT |
NCBI taxonomy identifier for the RefSeq protein. |
uniprot_taxon_id |
TEXT |
NCBI taxonomy identifier for the UniProt protein; it can differ from refseq_taxon_id. |
method |
TEXT |
Source-assigned mapping method — uniprot for a mapping imported from UniProt, identical for an identical protein sequence and assigned organism, or similar for the same assigned organism with >90% identity over >80% coverage. |