hgnc.family_resource_links

Python

In [1]:

import bedrock_bio as bb

rel = bb.load_table('hgnc.family_resource_links')

df = rel.limit(5).pl()  # Polars
df = rel.limit(5).df()  # Pandas
df.head()

Out[1]:

	sources	family_id	resource_id
0	[{'url': 'https://storage.googleapis.com/publi...	10	1536
1	[{'url': 'https://storage.googleapis.com/publi...	100	1128
2	[{'url': 'https://storage.googleapis.com/publi...	102	1398
3	[{'url': 'https://storage.googleapis.com/publi...	1022	1531
4	[{'url': 'https://storage.googleapis.com/publi...	1023	1310

R

In [1]:

library(bedrockbio)

lf <- load_table("hgnc.family_resource_links")
df <- head(lf, 5) |> collect()

head(df)

Out[1]:

Sample output (5 rows, showing 2 of 3 columns)
   family_id | resource_id
   --------- | -----------
0  10        | 1536
1  100       | 1128
2  102       | 1398
3  1022      | 1531
4  1023      | 1310

Description

Links between HGNC gene families and their external resources.

Partitions

Not partitioned.

Schema

Column	Type	Description
sources	STRUCT(url TEXT, filename TEXT, last_modified_at TIMESTAMPTZ, sha256 TEXT)[]	Provenance for the HGNC gene-family family_has_external_resource.csv file.
family_id	TEXT	HGNC gene-family identifier.
resource_id	TEXT	External resource identifier.