baseline_expression

Identifier

open_targets.baseline_expression

Description

Aggregated expression data generated from RNA-seq and mass spectrometry proteomic data [Target]

Partitions

• release
  • '26.06'

Schema

Column	Type	Description
celltypeBiosampleId	TEXT	Cell type identifier that maps to the cell type reported by study [bioregistry:cell ontology]
tissueBiosampleId	TEXT	Tissue identifier that maps to the tissue reported by study [bioregistry:uberon]
targetId	TEXT	Unique identifier for the target
datasourceId	TEXT	Origin of expression data
datatypeId	TEXT	Type of expression data
unit	TEXT	Unit for the target expression
celltypeBiosampleFromSource	TEXT	Tissue or cell type reported by study
min	DOUBLE	Minimum value of expression
q1	DOUBLE	First quantile of expression
median	DOUBLE	Median value of expression
q3	DOUBLE	Third quantile of expression
max	DOUBLE	Maximum value of expression
distribution_score	DOUBLE	Proportion of biosamples, within the dataset, that display median expression above a threshold
specificity_score	DOUBLE	Measure of how specific expression is to a biosample
tissueBiosampleFromSource	TEXT	Cell type reported by study
targetFromSourceId	TEXT	Target identifier from the source
tissueBiosampleParentId	TEXT	Broad tissue identifier that maps to the tissue reported by study [bioregistry:uberon]
celltypeBiosampleParentId	TEXT	Broad cell type identifier that maps to the cell type reported by study [bioregistry:cell ontology]
qualityControls	TEXT[]	Quality control flags or notes for baseline expression
release	TEXT	Partition column. Open Targets Platform release version (major.minor), e.g. 26.06. [Added during ingest.]