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ukb_ppp/variants

ColumnTypeDescription
variant_idString
rsidString
chromosomeString
position_grch37Int32
position_grch38Int32
effect_alleleStringHarmonized to the forward strand, alt_allele from dbsnp/vcf.
other_alleleStringHarmonized to the forward strand, ref_allele from dbsnp/vcf.
strandString
is_palindromicBoolean
in_dbsnpBooleanVariant with matching chromosome, position_grch38, and alleles was found in dbsnp/vcf.
was_flippedBooleanAlleles, beta, and effect_allele_frequency were flipped relative to the source files during harmonization.