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ukb_ppp/pqtls

ColumnTypeDescription
ancestryStringPartitioning column. One of {'AFR', 'ALL', 'AMR', 'CSA', 'EAS', 'EUR', 'MID'}.
proteinStringPartitioning column. UniProt accession number (in some instances, a pipe-delimited set of accession numbers assayed together, e.g. “).
panelStringPartitioning column. Generally one panel value per protein and can be safely ignored when already filtering by protein. Six protein values were included in multiple panels.
chromosomeString
positionInt32GRCh38 base pair location.
effect_alleleStringHarmonized to the forward strand, alt_allele from dbsnp/vcf.
other_alleleStringHarmonized to the forward strand, ref_allele from dbsnp/vcf.
betaFloat32Effect size estimate of the effect_allele.
standard_errorFloat32
effect_allele_frequencyFloat32Frequency of the effect_allele in the dataset.
neg_log_10_p_valueFloat32To convert: p_value = 10^(-neg_log_10_p_value).
variant_idString
infoFloat32
nInt32
chi_squaredFloat32